Publication

Large-scaleWGS Analysis on the supercomputer Fugaku
Satoshi Ito, Kenji Ono, and Satoru Miyano. 2024. In Proceedings of the 2024 14th International Conference on Bioscience, Biochemistry and Bioinformatics (ICBBB ‘24). Association for Computing Machinery, New York, NY, USA, 14–20. https://doi.org/10.1145/3640900.3640903

Error-bounded Scalable Parallel Tensor Train Decomposition
S. Xie, A. Miura and K. Ono, 2023 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW), St. Petersburg, FL, USA, 2023, pp. 345-353, https://doi.org/10.1109/IPDPSW59300.2023.00064
Acceleration of BAM I/O on distributed file systems
S. Ito, S. Miyano and K. Ono, 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Istanbul, Turkiye, 2023, pp. 3299-3304, https://doi.org/10.1109/BIBM58861.2023.10385370
Mixing Data Augmentation with Preserving Foreground Regions in Medical Image Segmentation
X. Liu, K. Ono and R. Bise, 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI), Cartagena, Colombia, 2023, pp. 1-5, https://doi.org/10.1109/ISBI53787.2023.10230495
Toward Feature-Preserving Vector Field Compression
Liang, X., Di, S., Cappello, F., Raj, M., Liu, C., Ono, K., Chen, Z., Peterka, T., and Guo, H., in IEEE Transactions on Visualization and Computer Graphics, vol. 29, no. 12, pp. 5434-5450, Dec. 2023, https://doi.org/10.1109/TVCG.2022.3214821

A Scalable Parallel Partition Tridiagonal Solver for Many-Core and Low B/F Processors
T. Mitsuda and K. Ono, 2022 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW), Lyon, France, 2022, pp. 860-869, https://doi.org/10.1109/IPDPSW55747.2022.00142
Efficient compressed database of equilibrated configurations of ring-linear polymer blends for MD simulations
Hagita, K., Murashima, T., Ogino, M., Omiya, M., Ono, K., Deguchi, T., Jinnai, H., and Kawakatsu, T., Scientific Data, 9(40), 2022, https://doi.org/10.1038/s41597-022-01138-3

ChOWDER: An Adaptive Tiled Display Wall Driver for Dynamic Remote Collaboration
Kawanabe T., Nonaka J., Hatta K., Ono K., _ In: Luo Y. (eds) Cooperative Design, Visualization, and Engineering. CDVE 2018. Lecture Notes in Computer Science_, vol 11151, 2018, Springer, Cham. https://doi.org/10.1007/978-3-030-00560-3_2
High-Performance Parallel Simulation of Airflow for Complex Terrain Surface
Kenji Ono and Takanori Uchida, Modelling and Simulation in Engineering, vol. 2019, Article ID 5231839, 10 pages, 2019. https://doi.org/10.1155/2019/5231839
Design of a Flexible In Situ Framework with a Temporal Buffer for Data Processing and Visualization of Time-Varying Datasets
Ono K., Nonaka J., Yoshikawa H., Nanri T., Morie Y., Kawanabe T., and Shoji F., Lecture Notes in Computer Science, 11203, 243-257, 2018. https://doi.org/10.1007/978-3-030-02465-9_17